Nevşehir Hacı Bektaş Veli University Course Catalogue

Information Of Programmes

INSTITUTE OF SCIENCE / MBG541 - MONECULER BIOLOGY AND GENETICS

Code: MBG541 Course Title: ADVANCED FILOGENETIC Theoretical+Practice: 3+0 ECTS: 6
Year/Semester of Study 1 / Fall Semester
Level of Course 2nd Cycle Degree Programme
Type of Course Optional
Department MONECULER BIOLOGY AND GENETICS
Pre-requisities and Co-requisites None
Mode of Delivery Face to Face
Teaching Period 14 Weeks
Name of Lecturer ZÜBEYDE KUMBIÇAK (zkumbicak@nevsehir.edu.tr)
Name of Lecturer(s)
Language of Instruction Turkish
Work Placement(s) None
Objectives of the Course
The aim of this course is to gain knowledge and skills about the basic processes of molecular genetics, mutations, genetic structure of populations, change of nucleotide sequences, models and ratios, molecular clock, molecular phylogeny, DNA barcoding.

Learning Outcomes PO MME
The students who succeeded in this course:
LO-1 can explain the basic concepts related to molecular phylogeny and DNA barcoding. PO-1 Obtain basic knowledge of Molecular Biology
PO-2 Have information about current topics in molecular biology and genetics
PO-4 Being ethical and responsible individuals who are sensitive to social and universal values in the field of Molecular Biology and genetics, who look after the priority areas of the country, research and produce and contribute to these issues
PO-5 Ability to design a research project in the field of molecular biology and genetics and to evaluate and present the results related to it
PO-6 Ability to independently carry out an activity that requires expertise in the field
PO-7 Investigating the phenotypic effects of genes and acquiring the ability to use this effect in animal and plant breeding areas
PO-8 Ability to participate in interdisciplinary studies in the fields of education, industry, agriculture, health, environment, energy and biotechnology
PO-9 Recognizes and explains the molecular biology and genetics of the problems of other disciplines
PO-10 Read and critically discuss the world-wide literature on molecular biology and molecular genetics
PO-11 Explains the basic functions of scientific processes, critically discusses and solves problems using appropriate statistical and computational methods, chooses contemporary experimental and theoretical approaches that will ultimately lead to the solution of molecular biology and genetic research problems
PO-12 To be able to transfer current developments and own studies in the field with quantitative and qualitative data to the groups in the field and outside the field in a systematic manner in written, oral and visual form
PO-13 Scientific developments contribute to research and development
Examination
PO: Programme Outcomes
MME:Method of measurement & Evaluation

Course Contents
Basic processes of molecular genetics, mutations, genetic structure of populations, changes in nucleotide sequences, models and ratios, molecular clock, molecular phylogeny, DNA barcoding
Weekly Course Content
Week Subject Learning Activities and Teaching Methods
1 Basic processes of molecular genetics Discussion Method Explanation Method
2 Mutations Discussion Method Explanation Method
3 Genetic structure of populations Discussion Method Explanation Method
4 Nucleotide sequences change Discussion Method Explanation Method
5 Models and rates Discussion Method Explanation Method
6 Models and rates Discussion Method Explanation Method
7 Molecular Clock Discussion Method Explanation Method
8 mid-term exam
9 Molecular Clock Discussion Method Explanation Method
10 Molecular phylogeny Discussion Method Explanation Method
11 Creation of phylogenetic trees Discussion Method Explanation Method
12 Maximum parsimony and maximum likelihood analysis Discussion Method Explanation Method
13 Neigbour joining and minimum evolution analysis Discussion Method Explanation Method
14 Network analysis and Bayesian analysis Discussion Method Explanation Method
15 DNA barcoding methods Discussion Method Explanation Method
16 final exam
Recommend Course Book / Supplementary Book/Reading
1 Klug W.S., Cummings M.R. and Spencer C.A. Genetik Kavramlar, Palme Yayıncılık, Ankara
2 Watson, Baker, Bell, Gann, Levine, Losick, Molecular Biology of the Gene, 6th Edition, Pearson Publications, 2008
Required Course instruments and materials
Course book

Assessment Methods
Type of Assessment Week Hours Weight(%)
mid-term exam 8 1 40
Other assessment methods
1.Oral Examination
2.Quiz
3.Laboratory exam
4.Presentation
5.Report
6.Workshop
7.Performance Project
8.Term Paper
9.Project
final exam 16 2 60

Student Work Load
Type of Work Weekly Hours Number of Weeks Work Load
Weekly Course Hours (Theoretical+Practice) 3 14 42
Outside Class
       a) Reading 5 7 35
       b) Search in internet/Library 5 8 40
       c) Performance Project 0
       d) Prepare a workshop/Presentation/Report 0
       e) Term paper/Project 0
Oral Examination 0
Quiz 0
Laboratory exam 0
Own study for mid-term exam 5 6 30
mid-term exam 1 1 1
Own study for final exam 5 6 30
final exam 2 1 2
0
0
Total work load; 180